uzh logo trep-db vers. 17 Aug 2016

TREP, the TRansposable Elements Platform

PTREP contains 113 RLG elements

Download all 113 RLG elements in PTREP (in FASTA format).

Click on links below to download individual datasets in FASTA format (e.g. grouped by species or families).


Grouped by species:

CodeGenusSpeciesTotal elements
RLGArabidopsisthaliana2
RLGBlumeriagraminis_tritici21
RLGCaenorhabditiselegans4
RLGDictyosteliumpurpureum9
RLGDrosophilamelanogaster2
RLGGuillardiatheta4
RLGHomosapiens1
RLGHordeumvulgare11
RLGOryzasativa6
RLGPerkinsusmarinus6
RLGPhytophthorainfestans1
RLGSaccharomycescerevisiae3
RLGSecalecereale1
RLGSorghumbicolor3
RLGTriticumaestivum5
RLGTriticumdurum1
RLGTriticummonococcum16
RLGTriticumunknown17



Grouped by families:

CodeFamilyTotal elements
RLGAbiba1
RLGAbiba_A2
RLGAsteria2
RLGAthila_B2
RLGBAGY23
RLGCarmilla2
RLGCereba2
RLGCNA1
RLGDagan1
RLGDamara1
RLGDanae2
RLGDaniela4
RLGDemeter3
RLGDpurA3
RLGDpurB1
RLGDpurC1
RLGDpurD2
RLGDpurE1
RLGEniola1
RLGErika4
RLGFatima8
RLGGA2
RLGGeneva1
RLGGtheA1
RLGGtheB1
RLGGtheC1
RLGGtheD1
RLGGypsyB1
RLGGypsyE1
RLGGypsyF1
RLGGypsyG1
RLGHaight1
RLGHestia2
RLGhopi1
RLGIdefix2
RLGJeli3
RLGLatidu1
RLGLaura3
RLGLoonie2
RLGMedea2
RLGNephele2
RLGNiobe1
RLGNusif2
RLGNyx1
RLGOsr301
RLGOsTaz1
RLGPhoebe1
RLGPinfA1
RLGPmarA1
RLGPmarB1
RLGPmarC1
RLGPmarD2
RLGPmarE1
RLGRetrosat11
RLGRhizA2
RLGRomani1
RLGSabrina1
RLGSabrina_A1
RLGSelene2
RLGSparta1
RLGSukkula2
RLGTethys1
RLGTheia1
RLGTy33
RLGunnamed1
RLGWHAM4
RLGWilma1