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TREP, the TRansposable Elements Platform

Fasta file for RIX elements in total_TREP

Sequences: 116
Total size: 371903 bp

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SequenceSize
RIX_Tmon_Karin_AF459088-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; putative complete element6413
RIX_Tmon_Ramona_109N23-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment3705
RIX_Hvul_Persephone_AY643843-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; NULL7919
RIX_Hvul_Morpheus_AY643843-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; complete element7966
RIX_Hvul_unnamed_AY013246-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 3' truncated4940
RIX_Hvul_BALN2_AB016120-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment of endonuclease414
RIX_Taes_Mara_AB012296-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment of CDS2016
RIX_Tmon_Isabelle_AF326781-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; complete element8408
RIX_Taes_Karin_AF325197-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment of 3' region3105
RIX_Tmon_Miuse_115G1-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; complete element7025
RIX_Hvul_unnamed_AJ270053-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment of reverse transcriptase585
RIX_Hvul_Nadine_AJ270056-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; complete element6302
RIX_Hvul_Nadine_AJ270054-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment of reverse transcriptase594
RIX_Taes_unnamed_AJ270055-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment of reverse transcriptase602
RIX_Hvul_Alexandra_AF427791-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; complete element3391
RIX_Scer_unnamed_Y13390-1 Secale cereale; Retrotransposon, non-LTR (SINE), unknown; fragment of reverse transcriptase787
RIX_Tmon_Karin_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment of 3' region1573
RIX_Tmon_Karin_AY146588-2 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment of 3' region536
RIX_Tmon_Karin_AY146588-3 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment of 3' region1040
RIX_Tmon_unnamed_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment of reverse transcriptase179
RIX_Tmon_Paula_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; complete element8163
RIX_Tmon_Yvonne_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; fragment of 3' region4002
RIX_Tdur_Karin_AY146587-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; complete element7841
RIX_Taes_Karin_1020F19-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; 3' end2308
RIX_Taes_Karin_1020F19-2 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; 3'end1799
RIX_Tdur_Karin_294D11-2 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; complete element ( bp TSD)6249
RIX_Tdur_Morpheus_294D11-2 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; 3'end230
RIX_Tdur_Stasy_294D11-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; complete element3276
RIX_Hvul_Karin_AY853252-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; partial CDS3398
RIX_Hvul_Sara_AY853252-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 3' fragment of CDS1205
RIX_Hvul_Yolanda_AY853252-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; degenerated CDS3419
RIX_Taes_Karin_464G14-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; complete element? 7223
RIX_Taes_Ramona_464G14-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; complete element?2934
RIX_Hvul_Karin_604D5-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 5' truncated3660
RIX_Hvul_unnamed_EF067844-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; degenrated CDS277
RIX_Hvul_unnamed_509D2-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; truncated1200
RIX_Tura_Nala_210J24-1 Triticum urartu; Retrotransposon, non-LTR (SINE), unknown; 5' truncated5553
RIX_Tdur_Nala_643D12-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; 5' truncated5563
RIX_Hvul_Ophelia_EF067844-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 5' truncated5315
RIX_Taes_unnamed_42j2-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2975
RIX_Taes_unnamed_42j2-10 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment222
RIX_Taes_unnamed_42j2-6 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment3077
RIX_Taes_unnamed_42j2-7 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment393
RIX_Taes_unnamed_42j2-8 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2269
RIX_Taes_unnamed_42j2-9 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment855
RIX_Taes_unnamed_59e04-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2964
RIX_Taes_Nicole_42j2-10 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment615
RIX_Taes_Nicole_42j2-11 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2310
RIX_Taes_Nicole_42j2-12 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment320
RIX_Taes_Nicole_42j2-13 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2608
RIX_Taes_Nicole_42j2-4 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment510
RIX_Taes_unnamed_42j2-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment246
RIX_Taes_unnamed_42j2-2 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment563
RIX_Taes_unnamed_42j2-3 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment1519
RIX_Taes_unnamed_42j2-4 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment1133
RIX_Taes_unnamed_42j2-5 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2817
RIX_Taes_Reina_EF540321-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment3380
RIX_Taes_Stasy_EF540321-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2915
RIX_Taes_Wendy_42j2-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment1437
RIX_Tunk_Karin_consensus-1 Triticum unknown; Retrotransposon, non-LTR (SINE), unknown; consensus sequence7904
RIX_Tunk_unnamed_DQ885757-1 Triticum unknown; Retrotransposon, non-LTR (SINE), unknown; 3'fragment3444
RIX_Hvul_Thurl_Gb3-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment1646
RIX_Hvul_Thurl_Gb3-2 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment1646
RIX_Hvul_Thurl_Gb3-3 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment1646
RIX_Hvul_Karin_Gb3-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 3-fragment1293
RIX_Hvul_Karin_Gb3-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment1499
RIX_Hvul_Karin_Gb3-2 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment1987
RIX_Hvul_Karin_Gb3-3 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment687
RIX_Hvul_Tehlma_Hn582D21-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; fragment7636
RIX_Hvul_Tevy_Gb3-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 3-fragment1486
RIX_Hvul_Thamina_HnBtr-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; 3-fragment1599
RIX_Taes_Morpheus_RND3B-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment241
RIX_Taes_Nicole_RND3B-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment2666
RIX_Taes_Stasy_consensus-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; consensus sequence3320
RIX_Taes_Adair_3Bsr2-36 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment1958
RIX_Bgt_Baras_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element3248
RIX_Bgt_Basima_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence3541
RIX_Bgt_Caia_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence1834
RIX_Bgt_Durga_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence201
RIX_Bgt_Egeria_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence664
RIX_Bgt_Kojin_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence2697
RIX_Bgt_Rabia_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence3293
RIX_Bgt_Saria_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence2215
RIX_Bgt_Wannabe_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence2671
RIX_Bgt_Egaya_RND-5 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1706
RIX_Bgt_PeleB_RND-4 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1756
RIX_Bgt_PeleB_RND-5 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1751
RIX_Unkn_Egaya_consensus-1 Unknown unknown; Retrotransposon, non-LTR (SINE), unknown; consensus sequence789
RIX_Hvul_Isis_HvMx296O15-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; complete element7141
RIX_Hvul_Nadja_Hv5-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; complete element6515
RIX_Osat_Rare1_Og11-1 Oryza sativa; Retrotransposon, non-LTR (SINE), unknown; complete element6399
RIX_Bgt_Deimos_PacBio-134 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1769
RIX_Bgt_Deimos_RND-14 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1767
RIX_Bgt_Deimos_RND-21 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1764
RIX_Bgt_Deimos_RND-22 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1766
RIX_Bgt_Deimos_RND-26 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1756
RIX_Bgt_Deimos_RND-29 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1748
RIX_Bgt_Deimos_RND-6 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element1770
RIX_Bgt_Deimos_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence1769
RIX_Bgt_LB_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence5317
RIX_Bgt_LD_RND-12 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5433
RIX_Bgt_LE_RND-13 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5746
RIX_Bgt_LE_RND-33 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5807
RIX_Bgt_LF_RND-23 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5272
RIX_Bgt_LG_RND-22 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5438
RIX_Bgt_LG_RND-89 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5435
RIX_Bgt_LH_RND-40 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5258
RIX_Bgt_LI_RND-43 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5901
RIX_Bgt_LJ_RND-75 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element4901
RIX_Bgt_LK_RND-76 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5528
RIX_Bgt_LL_RND-80 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5432
RIX_Bgt_LM_RND-91 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; complete element5461
RIX_Bgt_Sophocles_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; fragment3722
RIX_Taes_Thurl_Ta2B-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; fragment13908
RIX_Bgt_Egeria004_1_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; fragment;6143
RIX_Bgt_Deimos_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; consensus sequence1770