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TREP, the TRansposable Elements Platform

Fasta file for RLC elements in total_TREP

Sequences: 93
Total size: 626525 bp

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SequenceSize
RLC_Tmon_Angela_231A16-1 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8578
RLC_Tmon_Angela_609E6-1 Triticum monococcum; Retrotransposon, LTR, Copia; 5' fragment of LTR845
RLC_Tmon_Angela_609E6-2 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8720
RLC_Tmon_Angela_609E6-3 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8714
RLC_Atau_Angela_AF497474-1 Aegilops tauschii; Retrotransposon, LTR, Copia; complete element8755
RLC_Atau_Angela_AF497474-3 Aegilops tauschii; Retrotransposon, LTR, Copia; complete element8516
RLC_Tmon_Angela_109N23-1 Triticum monococcum; Retrotransposon, LTR, Copia; fragment3415
RLC_Tmon_Angela_109N23-2 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8716
RLC_Tmon_Angela_109N23-3 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8381
RLC_Tmon_Angela_109N23-4 Triticum monococcum; Retrotransposon, LTR, Copia; solo-LTR1735
RLC_Tmon_Angela_AF326781-6 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8642
RLC_Tmon_Angela_116F2-1 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8534
RLC_Tmon_Angela_115G1-1 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 5' region6420
RLC_Tmon_Angela_116F2-2 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 5' region5943
RLC_Tmon_Angela_116F2-3 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 3' region2844
RLC_Aspe_Angela_AB077369-1 Aegilops speltoides; Retrotransposon, LTR, Copia; 5' fragment of LTR423
RLC_Aspe_Angela_AB077371-1 Aegilops speltoides; Retrotransposon, LTR, Copia; fragment of LTR492
RLC_Tmon_Angela_AY146588-1 Triticum monococcum; Retrotransposon, LTR, Copia; solo-LTR1733
RLC_Tmon_Angela_AY146588-2 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 5' region4394
RLC_Tmon_Angela_AY146588-3 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 5' region4390
RLC_Tmon_Angela_AY146588-4 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8711
RLC_Tmon_Angela_AY146588-5 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8589
RLC_Tmon_Angela_AY146588-1 Triticum monococcum; Retrotransposon, LTR, Copia; fragment of 3' region5000
RLC_Tdur_Angela_AY146587-1 Triticum durum; Retrotransposon, LTR, Copia; complete element8721
RLC_Taes_Angela_1020F19-1 Triticum aestivum; Retrotransposon, LTR, Copia; fragement of LTR1262
RLC_Taes_Angela_1020F19-2 Triticum aestivum; Retrotransposon, LTR, Copia; solo-LTR1685
RLC_Taes_Angela_1020F19-3 Triticum aestivum; Retrotransposon, LTR, Copia; complete element8596
RLC_Taes_Angela_1020F19-4 Triticum aestivum; Retrotransposon, LTR, Copia; 5'fragment113
RLC_Tdur_Angela_294D11-2 Triticum durum; Retrotransposon, LTR, Copia; 5' fragment6240
RLC_Taes_Angela_464G14-1 Triticum aestivum; Retrotransposon, LTR, Copia; 3'fragment8625
RLC_Taes_Angela_464G14-2 Triticum aestivum; Retrotransposon, LTR, Copia; 5'fragment5434
RLC_Tura_Angela_210J24-1 Triticum urartu; Retrotransposon, LTR, Copia; 5' truncated7203
RLC_Tura_Angela_210J24-2 Triticum urartu; Retrotransposon, LTR, Copia; solo-LTR1654
RLC_Tura_Angela_210J24-3 Triticum urartu; Retrotransposon, LTR, Copia; complete element8559
RLC_Tdur_Angela_643D12-1 Triticum durum; Retrotransposon, LTR, Copia; complete element, internal deletion4018
RLC_Tdur_Angela_643D12-2 Triticum durum; Retrotransposon, LTR, Copia; truncated1489
RLC_Tdur_Angela_643D12-3 Triticum durum; Retrotransposon, LTR, Copia; complete element8556
RLC_Tdur_Angela_643D12-4 Triticum durum; Retrotransposon, LTR, Copia; 3' truncated850
RLC_Tdur_Angela_643D12-5 Triticum durum; Retrotransposon, LTR, Copia; complete element8572
RLC_Tmon_Angela_AY951944-1 Triticum monococcum; Retrotransposon, LTR, Copia; solo-LTR, 400 bp deletion at 10081808
RLC_Tmon_Angela_AY951944-2 Triticum monococcum; Retrotransposon, LTR, Copia; truncated LTR277
RLC_Tmon_Angela_AY951944-3 Triticum monococcum; Retrotransposon, LTR, Copia; complete element8480
RLC_Tmon_Angela_AY951945-1 Triticum monococcum; Retrotransposon, LTR, Copia; 5' truncated1968
RLC_Tmon_Angela_AY951945-2 Triticum monococcum; Retrotransposon, LTR, Copia; solo-LTR1731
RLC_Tmon_Angela_AY951945-3 Triticum monococcum; Retrotransposon, LTR, Copia; 5' truncated7091
RLC_Tmon_Angela_AY951945-4 Triticum monococcum; Retrotransposon, LTR, Copia; 5' truncated3348
RLC_Tmon_Angela_AY951945-5 Triticum monococcum; Retrotransposon, LTR, Copia; complete element (recombined)10465
RLC_Taes_Angela_42j2-4 Triticum aestivum; Retrotransposon, LTR, Copia; complete element8647
RLC_Taes_Angela_59e04-1 Triticum aestivum; Retrotransposon, LTR, Copia; complete element8561
RLC_Atau_Angela_AY534123-1 Aegilops tauschii; Retrotransposon, LTR, Copia; complete element8553
RLC_Tunk_Angela_A_consensus-1 Triticum unknown; Retrotransposon, LTR, Copia; consensus sequence;8724
RLC_Tunk_Angela_B_consensus-1 Triticum unknown; Retrotransposon, LTR, Copia; consensus sequence;8577
RLC_Hvul_Angela_A_Gb3-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily A;8766
RLC_Hvul_Angela_B_Gb3-1 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR, subfamily B;1733
RLC_Hvul_Angela_B_Gb3-3 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment, subfamily B;6280
RLC_Hvul_Angela_B_Gb3-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B;8158
RLC_Hvul_Angela_B_Gb3-5 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR, subfamily B;1739
RLC_Hvul_Angela_B_Gb3-6 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B;8505
RLC_Hvul_Angela_B_Gb3-7 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily B;4037
RLC_Taes_Angela_A_consensus-2 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence;8731
RLC_Taes_Angela_B_consensus-2 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence;8744
RLC_Taes_Angela_D_consensus-2 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence;8571
RLC_Taes_Angela_AA1_consensus-1 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8749
RLC_Taes_Angela_AA1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8755
RLC_Taes_Angela_AA2_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8723
RLC_Taes_Angela_AA3_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8733
RLC_Taes_Angela_AA4_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8744
RLC_Taes_Angela_AN1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8574
RLC_Taes_Angela_AN2_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8579
RLC_Taes_Angela_AN3_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8567
RLC_Taes_Angela_AN4_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8637
RLC_Taes_Angela_AN5_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8663
RLC_Taes_Angela_AN6_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8691
RLC_Taes_Angela_AN7_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8688
RLC_Taes_Angela_BA1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8744
RLC_Taes_Angela_BA2_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8733
RLC_Taes_Angela_BA3_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8734
RLC_Taes_Angela_BA4_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8732
RLC_Taes_Angela_BA5_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8720
RLC_Taes_Angela_BA6_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8721
RLC_Taes_Angela_BA7_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8729
RLC_Taes_Angela_BN1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8562
RLC_Taes_Angela_BN2_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8556
RLC_Taes_Angela_BN3_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8569
RLC_Taes_Angela_BN4_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8569
RLC_Taes_Angela_CA1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8741
RLC_Taes_Angela_CN1_consensus-3 Triticum aestivum; Retrotransposon, LTR, Copia; consensus sequence; variety=ArinaLrForv3;8723
RLC_Scer_Angela_AA1_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8718
RLC_Scer_Angela_AA2_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8720
RLC_Scer_Angela_AA3_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8720
RLC_Scer_Angela_AA4_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8719
RLC_Scer_Angela_AN1_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8573
RLC_Scer_Angela_AN2_consensus-3 Secale cereale; Retrotransposon, LTR, Copia; consensus sequence; variety=Lo7v1p1;8578