uzh logo trep-db vers. 17 Aug 2016

TREP, the TRansposable Elements Platform

BLAST Search against TREP Databases

Stop by at NCBI Books for a short BLAST Glossary and more available BLAST documentation.

Choose program to use and database to search:

Program   Database  

E-value cutoff What is the E-value?
The Expect (E-) value describes the number of hits one can 'expect' to see by chance when searching a database of a particular size (see Karlin and Altschul, 1990). The lower the E-value, the more likely this is a significant match.

Enter sequence in FASTA format